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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841810.1_cds_XP_016508120.1_21175
CDS Infomation

[gene=LOC107825727] [db_xref=GeneID:107825727] [protein=putative exopolyphosphatase isoform X4] [protein_id=XP_016508120.1] [location=join(17887..19011,19122..19295,20039..20080,20153..20233,20557..20676,22210..22308,22465..22515)] [gbkey=CDS]
Sequence

ATGTCGGCCAATCTCCCAATTCCTCTCAACACCACCTCAATTCCCGCCGTCAGAGATAAC
CTCTTCGCCGCCGTAGACCTCGGCACCAACTCCTTCAAGCTCCTCATAGTTCGCGCCGAC
CCTTCCACCGGCCGTTTCCTCACCCTCGATCGGTTTAAGGAAAGAGTACTCCTCGGCCTT
GATACTACCACCACCACTACCTCCGCCACTATCTCCACTGCCTCCCAGCTACGCGCCACG
ACAGCACTTCGAAAGTTTCAGAATCTTCTTCAGTCCCATCGCGTTCCTCCCTCCCATTCC
CGCCTCGTAGCCACTTCAGCTGTTCGAGAAGCTTCCAATCAATCGCAATTCCTTAACACG
ATCCATGAAATCCTAGGCCTGCAAGTTGACGTACTCTCCGGTCTCGAAGAGGCCCGCCTT
ATATACCAAGGTATACTTCAATTTCATCCTGTTCATGACCGTACAGTTCTTACAATTGAC
ATAGGAGGTGGCTCTACCGAGTTCGTAATTGGCAAAGAGGGCAACATTCTGTTCTCCATT
TCACTAGCGTTGGGGCATGTCACTTTAACTCAAAAATTTCCTGAAATTACAGAAATGCGG
GAAAATATTAAGGGTATAATCCGAGCCTCGGGTTTGAGCGAGAAGGTTAAGCATTACGAT
ATTAATAAAGTGATTGGTTCATCAGGGACGATTAGGAATATTGAAAAGGCTATTTTCCAT
GGCTATGCAAGTAAGATGGAGGGAAATGTGGGCATATTTGAGGAAAATAGGAGGGATTGG
AGTTTTACAATGGAAGAATTGAGGGGATTAGTGAAGAGGTTGAGCGAGGAAGAGAGAAGA
GTTGGGGGGATGGTTCAAAGGCAGAGTTTTTTCAAGAAGAGATCAGAATTTATTGTGGCA
GGGGCAGTTTTATTGGAGGAGATATTTAAGGAACTTAAGATTGAGGAGATGGAGGTTTCT
GTATATGCATTAGGGGAGGGTGTGATTGCAGAGAAGTTAGGGGAAGTTTTTAATCATTAT
GATCCGAGGGTGAATGCAAGGTGGAGGTCTGTAGTGAGGCTCGCGACAAGGTTTAATAAC
AAGCAGCGCATGAAATCTGCTGCATTGTGCTATAGTGTTGCGAAGGAGATATTTGATGGT
TTGAGAAAATGGTATGAATCGGGCAATGGTTCTGATGGATTCGTTGTATGCTTGGAGGAT
AAAGATCTTGAGTATCTTGAGGCAGCTTGTTTGCTTCACAAAATCGGTCTTTATGTTGGT
AAAAAGGGCTACCATAAGCAGTCTTACCATATTATAATGAATGGTGACCATCTGCATGGT
TATAATGATGAAGAGGTTAAGTTAATAGCTTTACTTGTGCGGCACCATAGAAAGAAACTT
CTCAAGTGTGATCATGTTGTGCTTGAGGAATTGACAGAAGAGATGAGATGGAAATCCAGA
ATTCTTTGTGCAATTCTACGTGTATCTGCTGCAATAGAACAACTTCAGCTGGTCAACATC
GACAATGCGGAATTCTCACATACCTGCGAAGGATTTAAATTGGTGCTTGAAGCAGGAAAT
TTGCCCTCCCCTGATAATGTGCTGCCATCAGTGAAAGACTTTGAGGCAGAGCTTGGTAAA
GAGTTGGAACACTTCAGAATGGTGTTCCAGGAAAGATTGTCAATTGCTGTCACTTCAAGC
ACTTCACCATAA

Peptide Sequence

PEP ID

XP_016508120.1
PEP Infomation

PREDICTED: putative exopolyphosphatase isoform X4 [Nicotiana tabacum]
Sequence

MSANLPIPLNTTSIPAVRDNLFAAVDLGTNSFKLLIVRADPSTGRFLTLDRFKERVLLGL
DTTTTTTSATISTASQLRATTALRKFQNLLQSHRVPPSHSRLVATSAVREASNQSQFLNT
IHEILGLQVDVLSGLEEARLIYQGILQFHPVHDRTVLTIDIGGGSTEFVIGKEGNILFSI
SLALGHVTLTQKFPEITEMRENIKGIIRASGLSEKVKHYDINKVIGSSGTIRNIEKAIFH
GYASKMEGNVGIFEENRRDWSFTMEELRGLVKRLSEEERRVGGMVQRQSFFKKRSEFIVA
GAVLLEEIFKELKIEEMEVSVYALGEGVIAEKLGEVFNHYDPRVNARWRSVVRLATRFNN
KQRMKSAALCYSVAKEIFDGLRKWYESGNGSDGFVVCLEDKDLEYLEAACLLHKIGLYVG
KKGYHKQSYHIIMNGDHLHGYNDEEVKLIALLVRHHRKKLLKCDHVVLEELTEEMRWKSR
ILCAILRVSAAIEQLQLVNIDNAEFSHTCEGFKLVLEAGNLPSPDNVLPSVKDFEAELGK
ELEHFRMVFQERLSIAVTSSTSP

Transcript Sequence

Gene sequence data has not been registered.